__eq__(self, other) | src.ffyapf.FF | |
__getstate__(self) | src.ffyapf.FF | |
__init__(self, options, verbose=True, printopt=True) | src.ffyapf.FF | |
__setstate__(self, state) | src.ffyapf.FF | |
addff(self, ffname, xmlScript=False) | src.ffyapf.FF | |
addff_txt(self, ffname, fftype, xmlScript) | src.ffyapf.FF | |
addff_xml(self, ffname) | src.ffyapf.FF | |
amber_frcmod | src.ffyapf.FF | |
amber_mol2 | src.ffyapf.FF | |
assign_field(self, idx, pid, fnm, ln, pfld, mult, cmd=None) | src.ffyapf.FF | |
assign_p0(self, idx, val) | src.ffyapf.FF | |
atomnames | src.ffyapf.FF | |
check_dupes(self, pid, ffname, ln, pfld) | src.ffyapf.FF | |
create_mvals(self, pvals) | src.ffyapf.FF | |
create_pvals(self, mvals) | src.ffyapf.FF | |
excision | src.ffyapf.FF | |
FFAtomTypes | src.ffyapf.FF | |
ffdata | src.ffyapf.FF | |
ffdata_isxml | src.ffyapf.FF | |
FFMolecules | src.ffyapf.FF | |
find_spacings(self) | src.ffyapf.FF | |
fromfile(cls, fnm) | src.ffyapf.FF | |
linedestroy_save | src.ffyapf.FF | |
linedestroy_this | src.ffyapf.FF | |
list_map(self) | src.ffyapf.FF | |
make(self, vals=None, use_pvals=False, printdir=None, precision=12) | src.ffyapf.FF | |
make_redirect(self, mvals) | src.ffyapf.FF | |
make_rescale(self, scales, mvals=None, G=None, H=None, multiply=True, verbose=False) | src.ffyapf.FF | |
map | src.ffyapf.FF | |
mktransmat(self) | src.ffyapf.FF | |
np | src.ffyapf.FF | |
offxml | src.ffyapf.FF | |
openmmxml | src.ffyapf.FF | |
patoms | src.ffyapf.FF | |
pfields | src.ffyapf.FF | |
plist | src.ffyapf.FF | |
print_map(self, vals=None, precision=4) | src.ffyapf.FF | |
prmdestroy_save | src.ffyapf.FF | |
prmdestroy_this | src.ffyapf.FF | |
pvals0 | src.ffyapf.FF | |
qid | src.ffyapf.FF | |
qid2 | src.ffyapf.FF | |
qmap | src.ffyapf.FF | |
Readers | src.ffyapf.FF | |
redirect | src.ffyapf.FF | |
rs | src.ffyapf.FF | |
rs_ord | src.ffyapf.FF | |
rs_type | src.ffyapf.FF | |
rsmake(self, printfacs=True) | src.ffyapf.FF | |
sprint_map(self, vals=None, precision=4) | src.ffyapf.FF | |
tinkerprm | src.ffyapf.FF | |
tm | src.ffyapf.FF | |
tmI | src.ffyapf.FF | |