| __eq__(self, other) | src.ffyapf.FF | |
| __getstate__(self) | src.ffyapf.FF | |
| __init__(self, options, verbose=True, printopt=True) | src.ffyapf.FF | |
| __setstate__(self, state) | src.ffyapf.FF | |
| addff(self, ffname, xmlScript=False) | src.ffyapf.FF | |
| addff_txt(self, ffname, fftype, xmlScript) | src.ffyapf.FF | |
| addff_xml(self, ffname) | src.ffyapf.FF | |
| amber_frcmod | src.ffyapf.FF | |
| amber_mol2 | src.ffyapf.FF | |
| assign_field(self, idx, pid, fnm, ln, pfld, mult, cmd=None) | src.ffyapf.FF | |
| assign_p0(self, idx, val) | src.ffyapf.FF | |
| atomnames | src.ffyapf.FF | |
| check_dupes(self, pid, ffname, ln, pfld) | src.ffyapf.FF | |
| create_mvals(self, pvals) | src.ffyapf.FF | |
| create_pvals(self, mvals) | src.ffyapf.FF | |
| excision | src.ffyapf.FF | |
| FFAtomTypes | src.ffyapf.FF | |
| ffdata | src.ffyapf.FF | |
| ffdata_isxml | src.ffyapf.FF | |
| FFMolecules | src.ffyapf.FF | |
| find_spacings(self) | src.ffyapf.FF | |
| fromfile(cls, fnm) | src.ffyapf.FF | |
| linedestroy_save | src.ffyapf.FF | |
| linedestroy_this | src.ffyapf.FF | |
| list_map(self) | src.ffyapf.FF | |
| make(self, vals=None, use_pvals=False, printdir=None, precision=12) | src.ffyapf.FF | |
| make_redirect(self, mvals) | src.ffyapf.FF | |
| make_rescale(self, scales, mvals=None, G=None, H=None, multiply=True, verbose=False) | src.ffyapf.FF | |
| map | src.ffyapf.FF | |
| mktransmat(self) | src.ffyapf.FF | |
| np | src.ffyapf.FF | |
| offxml | src.ffyapf.FF | |
| openmmxml | src.ffyapf.FF | |
| patoms | src.ffyapf.FF | |
| pfields | src.ffyapf.FF | |
| plist | src.ffyapf.FF | |
| print_map(self, vals=None, precision=4) | src.ffyapf.FF | |
| prmdestroy_save | src.ffyapf.FF | |
| prmdestroy_this | src.ffyapf.FF | |
| pvals0 | src.ffyapf.FF | |
| qid | src.ffyapf.FF | |
| qid2 | src.ffyapf.FF | |
| qmap | src.ffyapf.FF | |
| Readers | src.ffyapf.FF | |
| redirect | src.ffyapf.FF | |
| rs | src.ffyapf.FF | |
| rs_ord | src.ffyapf.FF | |
| rs_type | src.ffyapf.FF | |
| rsmake(self, printfacs=True) | src.ffyapf.FF | |
| sprint_map(self, vals=None, precision=4) | src.ffyapf.FF | |
| tinkerprm | src.ffyapf.FF | |
| tm | src.ffyapf.FF | |
| tmI | src.ffyapf.FF | |